Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKKKIDWRDERGFTLVEMLIVLLVVSVLLLLTIPNIVSQSKSINDKGCEAFISMVQGQVQSYQLDKNSIP-SVADLVSGGYLKANQKSCPNGNSIKIDSSGNVSEKK
2HI2 Chain:A ((1-61))
-------------FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENN----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HI2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9912 for 248 contacts (-40.0/contact) +
2D Compatibility (PS) -6050 + (NN) -1740 + (LL) 1528
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -20824.0 ( -83.97 by residue)
QMean score : 0.081
(partial model without unconserved sides chains):
PDB file :
Tito_2HI2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HI2-query.scw
PDB file :
Tito_Scwrl_2HI2.pdb
: