Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTVNNVGLRYGDKKLFEDVSIKFLPGNCYGLIGANGAGKSTFLKVLSGELDSQSGNVHIGSGERLAVLRQDHFQYDDELVLNTVIMGHERLYKIMDEKNAIYMKEDFSDEDGIRAAELEGEFAELDGWEAESDAAVLLNGLGIPTDLHGKLMKDLTGGEKVKVLLAQALFGKPDILLLDEPTNHLDIRAIHWLEEFLINFDNTVIVVSHDRHFLNKVCTHIADLDFSKIKLYVGNYDFWYESSQLAQTMMGDRNKKKEEKMKELQDFIARFSANASKSKQATSRKKMLEKITLEDIQPSSRRYPFIQFKPDREVGNDLLTVTNLSKTIDGVKILDNLSFSINRNDKVALVGDDEVAKTVLFQILAGEMEPDEGSYKWGITTSQSYFPKDNSEFFEENDMSLVEWLRQFSPEDDSEAFLRGFLGRMLFSGDEVLKKVRVLSGGEKVRCMLSKMMLSGSNVLLLDEPTNHLDLESITALNNGLEAFKGAIIFASHDHQLLQTIATRIINLSKDQFYNKEISYDEYLKEVMNVAE |
| 2IWH Chain:A ((443-728)) | --------LAYGAKILLNKTQLRLKRARRYGICGPNGCGKSTLMRAIA------NGQV-------------DGFPTQEEC--RTVYVEHD-----IDGTHSDTSVLDFVFESGVGTKE------------AIKDKLI---EFGFTDEMIAMPISALSGGWKMKLALARAVLRNADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKAYEELSNTDLEFKFPEPGYL------EGVKTKQ-----KAIVKVTNMEFQ-----YPGTS-KPQ----------------------ITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSG--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2IWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -109462 for 2005 contacts (-54.6/contact) +
2D Compatibility (PS) -30854 + (NN) -12066 + (LL) 17176
1D Compatibility (HY) -19200 + (ID) 4750
Total energy: -159156.0 ( -79.38 by residue)
QMean score : 0.378
|
|
|