Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LNERIFRENTRPVQVGNLTIGGSEELTIQSMTTTKTHDVEATVAEIHRLEEAGCQIVRVACPDERAANALSAIKKK-----IHIPLVADIHFDYRLALK---AIDAGVDKIRINPGNIGR-RDRVE---KVVNAAKAKNIPIRIGVNAGSLEKKIIQKYGYPTA-------------DGMVESAL-AHIKILE-DLDFYDIIVSLKASDVNLAIEAYDKASRAFNYPLHLGITESGTQFAGGIKSAAGLGAILSLGIGNTLRVSLSADPVE----EIKVAREVLKSFGLSSNAAMLISCPTCGRIEIDLIR-IANEVENYIAKIEVP-----------IKVAVLGCAVNGPGEAREADIGI----AGSNGEGLLFRHGKIIRKVPEAIMIDELKKEIDILAEEFFVKKIDLESLR |
2Y0F Chain:A ((4-378)) | -----MRRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRGRHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDKLVLSAKVSKARDLVWVYRELARRTQAPLHLGLTEAGMGVKGIVASAAALAPLLLEGIGDTIRVSLTPSPKEPRTKEVEVAQEILQALGLRAFAPEVTSCPGCGRTTSTFFQELAEEVSRRL-KERLPEWRARYPGVEELKVAVMGCVVNGPGESKHAHIGISLPGAGEEPKAPVYADGKLL---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y0F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151009 for 2567 contacts (-58.8/contact) +
2D Compatibility (PS) -36614 + (NN) -25315 + (LL) 4264
1D Compatibility (HY) -24800 + (ID) 6900
Total energy: -240374.0 ( -93.64 by residue)
QMean score : 0.517
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