Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEEQLSKRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEHIDVRKGNGLAVIEKKDVIDTIVIAGMGGALIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQNNWLITSEAILREDNKIYEIMVLAPSKKPVAWTKQEIFFGPCLLKDQSAIFKSKWRHEANTWQNIIQTISNNQPVSPENQAKIRE-LEHKIALVEDVLK |
3KU1 Chain:A ((2-221)) | -----ISKRLELVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPNNREDDLRIWLQDHGFQIVAESILEEAGKFYEILVVEAGQMKLSAS--DVRFGPFLSKEVSPVFVQKWQKEAEKLEFAL---------------EERQVLVDKIQAIKEVL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KU1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126703 for 1719 contacts (-73.7/contact) +
2D Compatibility (PS) -22254 + (NN) 17 + (LL) 1184
1D Compatibility (HY) -18800 + (ID) 4900
Total energy: -171456.0 ( -99.74 by residue)
QMean score : 0.484
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