Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEPFKSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYT-TDESQIIFIDTPGIHKPKHK--LGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEK-LKNVQTPVFLLINKIDLIAP-EDLFKLIEQ-YRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGI---EKNPKTEKLTINATIIVERSTQKGIIIGKQGQMLKQIGMRARKEIERLLGSKVFLEIWVKVQKNWRDKEHYLQDYGFDREEY |
3R9X Chain:A ((7-305)) | ----MKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYEPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDMITDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDANPNM--LVIKGEIIVDRENLKPIIIGKKGQRLKEIGKRARQELELILGRPVYLELWVKVVPDWRRRPEYVRLFGY----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191674 for 2313 contacts (-82.9/contact) +
2D Compatibility (PS) -32126 + (NN) -15919 + (LL) 636
1D Compatibility (HY) -31600 + (ID) 7100
Total energy: -277783.0 ( -120.10 by residue)
QMean score : 0.570
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