Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLEIDLLDETKNLLDEDKQLVENILQFAAEYLKIEQG-TELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDH-MEPDEEKVMFGLQKEVLDAYGLER
1TVI Chain:A ((12-131))
--------------------KLLENLKEKLEEIVKKEIGDVHVNVILVSEDEIKELNQQFRGQDRPTDVLTFPLME-----------------EDVYGEIYVCPLIVEENAREFNNTFEKELLEVVIHGILHLAGYDHEFEDKNSKEMFEKQKKYVE------
General information:
TITO was launched using:
RESULT:
Template:
1TVI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30603 for 810 contacts (-37.8/contact) +
2D Compatibility (PS) -12837 + (NN) -6347 + (LL) 2740
1D Compatibility (HY) -10400 + (ID) 2050
Total energy: -59497.0 ( -73.45 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_1TVI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TVI-query.scw
PDB file :
Tito_Scwrl_1TVI.pdb
: