Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKRQSNNRRIKQNLVEGSRSQQNTKRKKTNLVLNVLIIVVSLLIIGSLYFVLFKTESDPAQQENKTASSTAKKEDAAKSSEKKKDSSDDKTTETTESDDPNVAKVITKDWKPIGTEQTGDHVNSYSSTSVDWQEKRKAFSVATDIPVSNTSLWFVEQGADPATQAIGTLSTKENPDK-----AYRVYITW----VDGEGWQPTKVEELKTNDKR |
| 4H9Z Chain:A ((197-252)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------YLLEHGADPKKIVIGHMCGNTDPDYHRKTLAYGVYIAFDRFGIQGMVGAPTDEERVRT---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -347 for 231 contacts (-1.5/contact) +
2D Compatibility (PS) -4728 + (NN) 260 + (LL) 8892
1D Compatibility (HY) 2400 + (ID) 50
Total energy: 6427.0 ( 27.82 by residue)
QMean score : -0.043
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