Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNTKGKKITIIISIIILILVIATFSGYYYVKSQLEPKDEASKEKITVEIPAGSSISDISTILEDKKVINNASIFSFYVKYNNDTNLKAGNYELSPAMNTDQIVKKMQEGKTVAPAKLVIPEGYTLDQIADRIVAYQ----PKLKKADVLKTMDDPEFVASMIKAYPETVTND-VLNKSIKHPLEGYLYPATYTFKGTDVSAEQIITEMVKATDVNIAKYRDELTKQKMSVHKFLTMSSIIEKEATENVDRKMIASVFYNRLAKDMRLQTDPTVLYALGEHKSKTTYKDLEVDSPYNTYKNNGLPPGPISNSGDSSMEAALYPEKSDYLYFLANTKTGKVYFSKTLEEHNKLKEEHITKNN |
| 1J33 Chain:A ((24-77)) | --------------------------------------------------------------------------------------------------------------------------GY-LEEVALRLAALQGRVKPELGRGAVVVAAADHGVVAEGVSAYPQEVTRQMVLN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2868 for 182 contacts (15.8/contact) +
2D Compatibility (PS) -4739 + (NN) 4775 + (LL) 20328
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: 17382.0 ( 95.51 by residue)
QMean score : 0.094
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