Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKGFIELYRGTK-KESNIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEVVKISTGETGIDALQDKPSK
4USI Chain:A ((20-126))
-----RIEAIFRPWRLPFVIDTLSKYGIRGLTNTPVKGVGVQGGS-------EFGPSNLVDKEKLDIVVSRAQVDAVVRLVAASAYTGEIGDGKIFVHPVAEVVRIRTAETG----------
General information:
TITO was launched using:
RESULT:
Template:
4USI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38228 for 605 contacts (-63.2/contact) +
2D Compatibility (PS) -11190 + (NN) -7647 + (LL) 1244
1D Compatibility (HY) -7600 + (ID) 2250
Total energy: -65671.0 ( -108.55 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_4USI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4USI-query.scw
PDB file :
Tito_Scwrl_4USI.pdb
: