Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYAIIETGGKQIKVEAGQEIYVEKLAGEVGDVVTFDKVLFVG-GDSAKVGVPFVEGATVTAKVEKQGRAKKLTVYKYKPKKNYHKKQGHRQPYTKLTIDAINA
2J28 Chain:R ((1-103))
MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA
General information:
TITO was launched using:
RESULT:
Template:
2J28.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11826 for 623 contacts (19.0/contact) +
2D Compatibility (PS) -10478 + (NN) 3679 + (LL) 0
1D Compatibility (HY) -10000 + (ID) 2200
Total energy: -7173.0 ( -11.51 by residue)
QMean score : 0.054
(partial model without unconserved sides chains):
PDB file :
Tito_2J28.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J28-query.scw
PDB file :
Tito_Scwrl_2J28.pdb
: