Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVGVPKEIKNNENRVAMTPASVFSYVNAGHTVYVEKDAGIGSNYQDADFVQAGAKIVETAKEAW-DVDMVVKVKEPIASEYTYFKEGLLLFTYLHLANEPTLAKALMESKVNSVAYETVELADHTLPLLSPMSEVAGRMAAQIGAQFLQRTNGGMGVLLGGVPGVERSEVVIIGGGIAGTNAAKIAAGLGANVTILDMNLKRLRELDDIFGNQVQTLMSNDFNIETAVKKADLVIGAVLIPGAKAPKLVKEHVVKQMIPGSVLVDIAIDQGGIFETTDHVSTHDNPTYEKYGVLHYAVANMPGAVPRTSTLALTNATLPFGLKLANQGLEAAVQNDPFLLRGLNTYQGHITYKAVADSLDLPYTDSKELI |
2VOJ Chain:A ((1-370)) | MRVGIPTETKNNEFRVAITPAGVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWADADLLLKVKEPIAAEYGRLRHGQILFTFLHLAASRACTDALLDSGTTSIAYETVQTADGALPLLAPMSEVAGRLAAQVGAYHLMRTQGGRGVLMGGVPGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGS-RPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNATMPYVLELADHGWRAACRSNPALAKGLSTHEGALLSERVATDLGVPFTEPASVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223540 for 3333 contacts (-67.1/contact) +
2D Compatibility (PS) -39950 + (NN) -11287 + (LL) -76
1D Compatibility (HY) -33200 + (ID) 10100
Total energy: -318153.0 ( -95.46 by residue)
QMean score : 0.513
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