Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILLIDNYDSFTFNL-EQYLAEFSEVVVKRNDAADLIKIAALADG----IVLSPGPGKPSDAGLLEEVVAKFAKEKPLLGICLGHQAIGEVFGGEVKRAAKIRHGKVSTMRQTAGAIFANLPEEMPVMRYHSLIVDKNTLPDVLEVLAIATDDSEVMAMKVKDYPVYGLQFHPESIGTNDGKQMMENFIHIVEGARENGNLTTKSI
1I7S Chain:B ((4-185))
-ILLLDNVDSFTYNLVDQLRASGHQVVIYRNQIGAEVIIERLQHMEQPVLMLSPGPGTPSEAGCMPELLQRLRGQLPIIGICLGHQAIVEAYGGQVGQAGEILHGKASAIAHDGEGMFAGMANPLPVARYHSLV--GSNIPADLTV--NARFGEMVMAVRDDRRRVCGFQFHPESILTTHGARLLEQ-------------------
General information:
TITO was launched using:
RESULT:
Template:
1I7S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82565 for 1453 contacts (-56.8/contact) +
2D Compatibility (PS) -18497 + (NN) -1553 + (LL) 1888
1D Compatibility (HY) -17600 + (ID) 3900
Total energy: -122227.0 ( -84.12 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_1I7S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I7S-query.scw
PDB file :
Tito_Scwrl_1I7S.pdb
: