Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VIPAKLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYDLISENPKILCGFSDITALATAIYTQTELITYSGAHFSSFSMEKGLDYVMESFSDCLLQKEPFALKESATWSDDEWYLDQENRNFIPNEGLVVMQPGVAEGIIIGGNLCTLNLLQGTEYMPNLAGTILFIEDDFMT---IPETFDRDLESLLSQPGADEIEGMVIGRFQQKTAMTAEKLAYIIETKTALQKIPVISGADFGHTQPIATFPIGGTAR-IDTNQTDKIQIIRH |
4E5S Chain:A ((5-331)) | -LPTKLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGGYNSNGLLKYLDYDLIRENPKFFCGYSDITALNNAIYTKTGLVTYSGPHFSSFGMEKGLEYTTDYFLQCLTSNKPIEVLPSETWSDDSWYIDQENRKFIKNEGYVSIHEGEATGDIIGGNMSTLNLLQGTSYMPNLKDKILFLEEDSLTGTSTLKTFDRYLHSLMQQQNFKHVKGIVIGKMQKGAECTIEDIQEMIASKPELAHIPIIANASFGHTTPIFTFPIGGRATIISSKEKTSITILTH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221573 for 2860 contacts (-77.5/contact) +
2D Compatibility (PS) -33656 + (NN) -5498 + (LL) 192
1D Compatibility (HY) -34800 + (ID) 9100
Total energy: -304435.0 ( -106.45 by residue)
QMean score : 0.553
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