Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAMNEQDEMLVMSGKEHREVLKRMLSYTKYHIPSLIWTGVLVLLVTLADVFAPILIKIFLDDYLTPMNLEM--QALLILGAGYLGLTIGKSVVWYFQLLFFQKIALEIVQQMRIDIFTKLHSLGMRYFDKTPAGSIVSRVTNDTEAVKDMFINVLSTAIQSLFMLVGIYAAMFALNVQLALYSLLLFPLIVFIIFVYRKYSSQFYRARREKLSQLNAKIAESISGMSIVQQFNQERRLVKEFEKINKDYYDVGMKNIKFNALLLGPAIDLIYALAVVIILSFFGAESLIGPVAIGTIYAFISYFDRFLEAIYNVMERLAMYQEAITAASRVFRIMDETEEVPAQLNDPEA---KITRAKIEFKDVSFAYEGGRDVLKNISFTAEPGQTVALVGHTGSGKSSIINLMMRFYEFERGDILIDGKSIKSHEITELRKKTGLVLQDSFMFYGDINTNIRLYDKSITDEQIVDAAKFVQADGFIQTLSDEYNHKVIERGASFSSGQRQLISFARTVVTNPQILVLDEATANIDTETESLIQTGLKRMREGRTTIAIAHRLSTIKDADLILVLSKGRIIERGTHDSLIAEEGVYHSMYQLQNSGMDLDEAL |
| 4Q4A Chain:B ((19-590)) | ---------------KNPTATLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIY-ALT---SLLFWLQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVL-PPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEK----DDPDAVELREVRGEIEFKNVWFSYDKKKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYELFTSQ---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -376337 for 4157 contacts (-90.5/contact) +
2D Compatibility (PS) -60273 + (NN) -20182 + (LL) 2544
1D Compatibility (HY) -57200 + (ID) 10650
Total energy: -522098.0 ( -125.59 by residue)
QMean score : 0.423
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