Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVSNATLKEAVDVLKKTGVRITPQRHAILEFLINSHTHPTADDIYRALEGNFPNMSVATVYNNLRVFRDAGLIKELSYG-DASSRFDFSTSNHYHAICNVCGKIVDFHYPGLDEVEHFAAHMTGYEIDNHRLEVYGICPACKEKQSNN
4I7H Chain:A ((20-148))
--------------LREKHIRITETRKAIISYMIQSTEHPSADKIYRDLQPNFPNMSLATVYNNLKVLVDEGFVSELKISNDLTTYYDFMGHQHVNVVCEICGKIADFMDVDVMDIAKEAHEQTGYKVTRIPVIAYGICPDCQ------
General information:
TITO was launched using:
RESULT:
Template:
4I7H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71524 for 786 contacts (-91.0/contact) +
2D Compatibility (PS) -13885 + (NN) -5306 + (LL) 1528
1D Compatibility (HY) -14400 + (ID) 2800
Total energy: -106387.0 ( -135.35 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_4I7H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I7H-query.scw
PDB file :
Tito_Scwrl_4I7H.pdb
: