Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKVALVTGSSRGLGREIAIALAKEGYDIAVNFSRNRKKAEEVQQEIEQLGRKCVIFKANVGDVEKVRELFKAVDEEFGRLDIFINNAASGVLRP--LMELEESHWDWTMNINAKALLFAGQEAAKLMQRHQSGKIISLSS-IGSIRY--LENYTTVGVSKAAVESLTRYLAVELAPFGIAVNAVSGGLIETDALNHFPNREELLKDAVSKTPAGRMIEPNDLVNAVLFLASEKADMIRGQTILVDGGRTLLV
3SJ7 Chain:A ((10-249))
-TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNA--GITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVA---TKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT------DELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG-----
General information:
TITO was launched using:
RESULT:
Template:
3SJ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86134 for 1979 contacts (-43.5/contact) +
2D Compatibility (PS) -25400 + (NN) -11875 + (LL) 1208
1D Compatibility (HY) -14400 + (ID) 5200
Total energy: -141801.0 ( -71.65 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_3SJ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SJ7-query.scw
PDB file :
Tito_Scwrl_3SJ7.pdb
: