Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKVRGFEVVNEASRKFPEQTISLPIRGDKGSAGYDFFSNETVTIVPGEKHIFWTDIKSYMQEDEVLNIYVRSSIGIKKGLLLCNGTGIIDSSYYSNPGNDGNIGIAIKNFSNEPVSIEAGERVAQGVFQKYLVADTDIVA----NESRVGGVGSTGR
3EHW Chain:A ((33-163))
------------------EHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKH--FIDVGAGVIDEDY------RGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERGSGGFGSTGK
General information:
TITO was launched using:
RESULT:
Template:
3EHW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48028 for 806 contacts (-59.6/contact) +
2D Compatibility (PS) -13396 + (NN) -64 + (LL) 976
1D Compatibility (HY) -7200 + (ID) 2100
Total energy: -69812.0 ( -86.62 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_3EHW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EHW-query.scw
PDB file :
Tito_Scwrl_3EHW.pdb
: