Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIMLVCSAGMSTSLLVKKMTEAIEKQQVDATVIAVAEADFDKYKGNVDVVLLAPQVRFLEKNLKRVLDPLGIPVAIINGIDYGTMDGEKVLNDALAMIEK
2WY2 Chain:D ((2-91))
-KHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLP--NKPVEVIDSLLYGKVDGLGVL---------
General information:
TITO was launched using:
RESULT:
Template:
2WY2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81783 for 669 contacts (-122.2/contact) +
2D Compatibility (PS) -9834 + (NN) -5244 + (LL) 1132
1D Compatibility (HY) -10000 + (ID) 1950
Total energy: -107679.0 ( -160.96 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_2WY2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WY2-query.scw
PDB file :
Tito_Scwrl_2WY2.pdb
: