Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSNISKETVEKVANLAKLEVSETEATAFAGQLGKIIELVEQLNTLDTTNVEPTSHAIDVSNVLREDVATKGLDRKEVLKNAPDEQDGMFKVPTIMEQ
2F2A Chain:C ((3-94))
--KVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTI---
General information:
TITO was launched using:
RESULT:
Template:
2F2A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11541 for 387 contacts (-29.8/contact) +
2D Compatibility (PS) -9741 + (NN) -1861 + (LL) 580
1D Compatibility (HY) -6000 + (ID) 2150
Total energy: -30713.0 ( -79.36 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_2F2A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F2A-query.scw
PDB file :
Tito_Scwrl_2F2A.pdb
: