Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQWTVKEMAAYVGISADTLRYYEKNKIIVPNRLE-NGYRVYNTEHLLELKFILVMKYARFSLSEIKLMMEWLRSEPSVACNTASKELLALKAAEIKQTIAHYTKIAALLEELPQIDEVQDYSTVQKDVNTFVEHIFTDIRKDGF
3QAO Chain:A ((6-100))
-----IKELAELTGVSVRTLHHYDKIGLLVPQKDDWNGYRIYSEKDVDKLQQILFFKELDFPLKKIQQILDDPLFDKNVALD-MQRHLLIEKKQRIETMLA--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QAO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47156 for 554 contacts (-85.1/contact) +
2D Compatibility (PS) -10435 + (NN) -7231 + (LL) 4236
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -69686.0 ( -125.79 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_3QAO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QAO-query.scw
PDB file :
Tito_Scwrl_3QAO.pdb
: