Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDPSVAVQAISLVDGLLLTGGQDITPQFYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGSLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAKHHPNKKLVNSLHHQFIKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTMVK |
| 2VXO Chain:A ((59-207)) | --------------------------------------------FPLETPAFAIKEQGF-RAIIISGGP---------------APWFDP----------AIFTIGKPVLGICYGMQMMNKVFGGTV-------------HK--------VFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARS--GNIVAGIANESKKLY-GAQFHPEV------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -54752 for 928 contacts (-59.0/contact) +
2D Compatibility (PS) -13046 + (NN) -3756 + (LL) 9380
1D Compatibility (HY) -10000 + (ID) 2050
Total energy: -74224.0 ( -79.98 by residue)
QMean score : 0.322
|
|
|