Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LFEKTNRMNLLFDFYQELLTTKQKAYVSFYYLDDYSLGEIAEEFEVSRQAIYDNIKRTEESLEKYEEKLGMLKKYQQREKLFTQLEAQLTKKNFLDEQVKDTLEQLKNID
3F6O Chain:A ((8-97))
----------LNGIFQALADPTRRAVLGRLSRGPATVSELAKPFDMALPSFMKHIHFLEDSGWIRTHKQGRVRTCAIEKEPFTAVEAWLAEQQELWESRT----------
General information:
TITO was launched using:
RESULT:
Template:
3F6O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13341 for 564 contacts (23.7/contact) +
2D Compatibility (PS) -9016 + (NN) 3155 + (LL) 1516
1D Compatibility (HY) -2800 + (ID) 950
Total energy: 5246.0 ( 9.30 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_3F6O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6O-query.scw
PDB file :
Tito_Scwrl_3F6O.pdb
: