Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVHIEAKQGEIAETILLPGDPLRAKYIAETFLEDVVLFNQVRGMLGFTGTYKGEKVSVMGTGMGIPSISIYVNELIQSYDVKNLIRVGTMGGIQADVKVRDVVIAQAASTDSQINRNTFAGVDFAPVADFSLLKKAYDAGIEKGLSLKVGNVFSADRFYNDQLDK-QQLADYGVLGIEMEAAALYTLAQKYGRRALAILTVSDHIFTGEETSAEERQTTFNDMIVVALEAAIK
3UAY Chain:A ((2-234))
-SVHIEAKQGEIAESILLPGDPLRAKYIAETFLEDVTCYNNVRGMLGFTGTYKGKRVSVQGTGMGVPSISIYVNELIQSYGVKNLIRVGTCGAIQKDVKVRDVIIAMTACTDSNMNRLTFPGFDFAPAANFDLLKKAYDAGTEKGLHVRVGNVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYTLAAKYGVNALSVLTVSNHIFTGEETTSEERQTTFNEMIEIALDAAIQ
General information:
TITO was launched using:
RESULT:
Template:
3UAY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -172109 for 2049 contacts (-84.0/contact) +
2D Compatibility (PS) -24403 + (NN) -3756 + (LL) 208
1D Compatibility (HY) -29600 + (ID) 8750
Total energy: -238410.0 ( -116.35 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_3UAY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UAY-query.scw
PDB file :
Tito_Scwrl_3UAY.pdb
: