Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRTMMNGKIHRATVTEANLNYVGSITIDSAILEAVDMLPNEKVQIVNNNNGARIETYIIPGEPGSGVICLNGAAARHVQVGDVVIIMSYGMFTDEEAKTHEPKIVVLDEKNHIEMILPEEKAHTTL
1PQE Chain:A ((1-115))
MIRTMLQGKLHRVKVTHADLHYEGACAIDQDFLDAAGILENEAIDIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWRPNVAYFEGDNEMK------------
General information:
TITO was launched using:
RESULT:
Template:
1PQE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80437 for 856 contacts (-94.0/contact) +
2D Compatibility (PS) -12835 + (NN) -5194 + (LL) 1188
1D Compatibility (HY) -10400 + (ID) 2600
Total energy: -110278.0 ( -128.83 by residue)
QMean score : 0.687
(partial model without unconserved sides chains):
PDB file :
Tito_1PQE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PQE-query.scw
PDB file :
Tito_Scwrl_1PQE.pdb
: