Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LLYSLLANRAFLRLLFFGNLLGAIYGYIWYLPQLQMTEPRFWLFVPDSPTAILFFTLALVAFLGKKHWPLMEALGFVCLVKYGLWAVGMNIFYMVDQGVLVWGSVVLILTHGFMAVEGILYAPFYRFRIGHFMIAAVWVFHNDVIDYVFGQMPIYMGLEKYLPEIGYATFWLTVLVLWFVYDKTIKNKHLTLEFPHDE |
2JP3 Chain:A ((27-54)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLCIAGIALALSGKCKCRRNHTPSSLPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -960 for 109 contacts (-8.8/contact) +
2D Compatibility (PS) -2795 + (NN) -1865 + (LL) 15360
1D Compatibility (HY) 0 + (ID) 150
Total energy: 9590.0 ( 87.98 by residue)
QMean score : 0.108
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