Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKTLFDKLWNRHVIYGKEGEPQLLYVDLHLIHEVTSPQAFEGLRLEN-RPLRRPDKTFATMDHNVPTEDIFNIQDLVAKKQIEALQTNCAEFGVT-LADMGSDRQGIVHMVGPETGLTQPGKVIVCGDSHTATHGAFGAIGFGIGSSEVEHVFATQTIWQQKPKSMGIEINGKLPKGVYAKDIILHLIATYGVAFGTGYAVEYYGETIRNMSMEERMTICNMAIEGGAKMGMMAPDETTFEYVRGREYAPTDMDKAISDWKTLQTDSDAEYDLHIKMDASILEPYVTWGTNPEMGVPFSKAFPEIKDMNYERAYEYMGLKPGQTAEQIELGYVFIGSCTNARLSDLEEAARIV-KGNKVKNNIRALVVPGSRQVRNAAESIGLDKIFIEAGFEWREPGCSMCLGMNPDQVPDGVHCASTSNRNFEGRQGK-GARTHLVSPAMAAAAAINGHFIDIRKVAVISGGN |
| 4KP1 Chain:A ((50-443)) | --------------------------IDVAMVHDITGPLTVNTLKEYGIEKVWNPEKIVILFDHQVPADSIKAAENHILMRKF------VKEQGIKYFYDI---REGVCHQVLPEKGHVAPGEVVVGADSHTCTHGAFGAFATGIGSTDMAHVFATGKLWFKVPETIYFNITGDLQPYVTSKDVILSIIGEVGVDGATYKACQFGGETVKKMSIASRMTMTNMAIEMGGKTGIIEPDEKTIQYVK----EAMKKHGTERPFEVIKGDEDAEFAEVYEIEADKIEPVFACPHNVD---------------NVKQAREVAG-KP--------IDQVFIGSCTNGRLEDLRMAIKIIEKHGGIADDVRVVVTPASREEYLKALKEGIIEKFLKYGCVVTNPSCSACMGSLYGVLGPGEVCVSTSNRNFRGRQGSLEAEIYLASPITAAACAVKGELVDPR--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212974 for 3584 contacts (-59.4/contact) +
2D Compatibility (PS) -42249 + (NN) -13716 + (LL) 4140
1D Compatibility (HY) -26000 + (ID) 7500
Total energy: -298299.0 ( -83.23 by residue)
QMean score : 0.464
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