Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKQKEQLSVEVARLYYQADLGQQEIATRLGVSRPTVSRLLQNAKTKGYVKIEVQDPFSNLTELAVALKEKYQLKNVTVAFSQTNDYSEITKQISQSAAEYLEEIIHDGDILGVSWGTTMYKIAQKLSPLKAEIK---VVQLKGGVSHSDVNTYAAETLALFGAAYDTAPVSLP-LPVVLDNPLAKQMVEADRHIKNIIELGKKANIAIFTVGT--VRDEALLFRLGYFSDQEKARLKEKAV-GDICSRFFTIDGEIADEKMDERTIGINLQELKQKETAILVAGGERKIKAIHGALRGGYANHFITDQFTAKQLLEQNFIN |
| 2W48 Chain:A ((8-315)) | ------RLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVTIAINYDYNENLWLEQQLKQKFGLKEAVVASS----EEEQLSAMGQHGALLVDRLLEPGDIIGFSWGRAVRSLVENL-PQRSQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGSPAIRDGANWH--AFYGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGRYINCLVTNRETAELLLK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157353 for 2415 contacts (-65.2/contact) +
2D Compatibility (PS) -32385 + (NN) -12161 + (LL) 1044
1D Compatibility (HY) -24000 + (ID) 5150
Total energy: -230005.0 ( -95.24 by residue)
QMean score : 0.504
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