Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSILMNQAIQAFLLEDIGQYDLSAGT-----VFPRDTMGEGVFLAKETGILCGISIPPKVY-ELLGGNIQFEAYKKDGDWVQKGDIIAAVKAPVRTLLSGERVILNLMQRMSGIASQTNFAIKQLDDSAIRICDTRKTAPGLRAFDKYAVQTGGGFNHRNGLYDGVMLKDNHIAFSGGITSAVSTVRGKLGHMVKIEVETETAEQVKEAVQAGADIIMFDNRTPEEIKQLVKLVPPHITTEISGNVTLENIHRYKGSGANYISLGSLTHSVRAFDISFNSKGGIKA |
| 1QAP Chain:A ((25-293)) | --------AVAQALREDLGG-EVDAGNDITAQLLPADTQAHATVITREDGVFCGKRWVEEVFIQLAGDDVRLTWHVDDGDAIHANQTVFELQGPARVLLTGERTALNFVQTLSGVASEVRRYVGLLAGTQTQLLDTRKTLPGLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEKAFW-LHPDVPVEVEVENLDELDDALKAGADIIMLDNFNTDQMREAVKRVNGQARLEVSGNVTAETLREFAETGVDFISVGALTKHVRALDLSM-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139591 for 2075 contacts (-67.3/contact) +
2D Compatibility (PS) -28647 + (NN) -10453 + (LL) 908
1D Compatibility (HY) -16800 + (ID) 5100
Total energy: -199683.0 ( -96.23 by residue)
QMean score : 0.416
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