Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFDWLTNSTAIIIILPVVV-FILTMFFSSFKLKKSQRRIMLAADLSTIFLIIAVHFFMIVLFNRSFLLYILLF-LFILGIVIVVTAAKKEGEIQFRKILRGYWRLCFFIFALLYVALYLYGIVYSLVLMF
4K0J Chain:A ((859-943))
----------LAVILPMVLALMFVLLF-------QPALILMAVPLATLGGLVALHLRGMTLNVSSAVGFIALFGVAVLNAIIMI----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4K0J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76442 for 348 contacts (-219.7/contact) +
2D Compatibility (PS) -6467 + (NN) -1244 + (LL) 6424
1D Compatibility (HY) -9600 + (ID) 900
Total energy: -88229.0 ( -253.53 by residue)
QMean score : 0.192
(partial model without unconserved sides chains):
PDB file :
Tito_4K0J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K0J-query.scw
PDB file :
Tito_Scwrl_4K0J.pdb
: