Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFLKVWSVLTIICMTVVVFGGALVTKTGSADGCGN-SWPLCNGQLVRLTDVTPEKLIEFMHRMTTGISSIFVIVLAICAWIYMKNRRETKPLAIIAVLFLIIQALMGMAAVVWGQNPYIMALHFGISIICYASIVLLALMIFEVDRKFDARNLVMGTKLRVNIYALTIYTYLAVYTGALVRHEKASMAVPVWPFENGHFIMPTSVQDYVQYFHRLAAFILIVWLLYVTWLVFRDYRRYRVLTFSMVLSLVFIALQAVTGALSVYTGVNLYIALAHSLIITMLFALLCYLCLLASRSKSNRLRIK |
1WQB Chain:A ((9-21)) | --------------------------------EACGPWEWPCCSG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 137 for 31 contacts (4.4/contact) +
2D Compatibility (PS) -1558 + (NN) -1526 + (LL) 31104
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 26257.0 ( 847.00 by residue)
QMean score : 0.357
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