Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKTKRKMIYETFMLILILLSLALLPYRNNFTFILNWIIWVIFTLDYLVRLYRADNKWHYVKTHPFQLIAIIPFYGGFRAARIVSFV--HLLSIT-----------------AMGRRYIVPI---------YSFFRSNGLNRFLMIFVLLVIIIPVPMVFIEPEINNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRAKKPTNSSTQRANKITQLISETPDLTKEEIAVVEQFLTLRKKELADENTKSDSE
2A0L Chain:A ((54-231))
--------------------------------YLVDLILVIILWADYAYRAYKSGDPAGYVKKTLYEIPALVP-------AGLLALIEGHLAGLGLFRLVRLLRFLRILLIISRGSKFLSAIADAADKIRFYHLFGAVMLTVLYGAFAIYIVEYPDP----NSSIKSVFDALWWAVVTATTVGYGDVVPATPIGKVIGIAVMLTGISALTLLIGTVSNMFQ------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2A0L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129128 for 958 contacts (-134.8/contact) +
2D Compatibility (PS) -14887 + (NN) -1459 + (LL) 8064
1D Compatibility (HY) -18800 + (ID) 2600
Total energy: -158810.0 ( -165.77 by residue)
QMean score : 0.102
(partial model without unconserved sides chains):
PDB file :
Tito_2A0L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A0L-query.scw
PDB file :
Tito_Scwrl_2A0L.pdb
: