Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEEYQKAVQSLYAIAYTIKMSKMGETRLNGYADFVVPPLEGFWWSEEKFDLKDRDAWLWTSILRQPDFVTEEVLEWAKEVAQKKKPDVDTSRVKLVRFEEGECVQMMHIGPFSEEVKTVAELHQFMETEGLHNDTGAVRKHHEIYLSDPRKADPEKMKTILRLPVS |
| 2KCU Chain:A ((84-153)) | -----------------------------------------------------------------------------------------------------------------------------------SGRVVTGLTPSGKAASSLYIGPYGEIEAVYDALMKWVDDNGFDLSGEA----YEIYLDNPAETAPDQLRTRVSL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13456 for 350 contacts (-38.4/contact) +
2D Compatibility (PS) -7384 + (NN) -3393 + (LL) 9760
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -18173.0 ( -51.92 by residue)
QMean score : 0.336
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