Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKVIVACGSGVATSQTVASKVERILKEKGV----RATVEAVDIKSLEQHIKTSDVYVAITKANKEFDIPTLNGIAFLTGMGMDEETE-KLLNALK |
3CZC Chain:A ((1-93)) | MVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCSVGEAKGLASNY---DIVVASNHLIHELDGRTNGKLIGLDNLMDDNEIKTKLEEALK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CZC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 644 for 610 contacts (1.1/contact) +
2D Compatibility (PS) -8533 + (NN) 2800 + (LL) 88
1D Compatibility (HY) 800 + (ID) 850
Total energy: -5051.0 ( -8.28 by residue)
QMean score : 0.152
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