Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKMAVISLVLLLFLVGCGKEEAAQKPEQKTDKEPKIVATTVAITEIMDKLDLPLVGIPSSSKKLPKRYADVKETGSPMGPDLEIIRMLKPDMVLSTKTLEADLK-SGFEGADLEADFLDFTSIASMQTEIKNLGAKFDRIEEATKLNKDLTSDIDQVKSNVAKKKKPTVLILMGVPGSYLVVTEHAYIGDLVKLAGGENVIKDQKVEYLASNTEYLQSANPDIILRAAHGMPAEVVKM---FDEEFKTNDIWKHFDAVKNNRVYDLDENLFGMTASLNAPEALKEMEKMLYDN
1N4A Chain:A ((2-211))----------------------------------PRVITLSPANTELAFAAGITPVGV-SSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQ-NQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIV--ITGGPDQIPKIKQYWGEQLK----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1N4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79698 for 1521 contacts (-52.4/contact) +
2D Compatibility (PS) -22128 + (NN) -12313 + (LL) 6536
1D Compatibility (HY) -8400 + (ID) 2450
Total energy: -118453.0 ( -77.88 by residue)
QMean score : 0.447

(partial model without unconserved sides chains):
PDB file : Tito_1N4A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1N4A-query.scw
PDB file : Tito_Scwrl_1N4A.pdb: