Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKMAVISLVLLLFLVGCGKEEAAQKPEQKTDKEPKIVATTVAITEIMDKLDLPLVGIPSSSKKLPKRYADVKETGSPMGPDLEIIRMLKPDMVLSTKTLEADLK-SGFEGADLEADFLDFTSIASMQTEIKNLGAKFDRIEEATKLNKDLTSDIDQVKSNVAKKKKPTVLILMGVPGSYLVVTEHAYIGDLVKLAGGENVIKDQKVEYLASNTEYLQSANPDIILRAAHGMPAEVVKM---FDEEFKTNDIWKHFDAVKNNRVYDLDENLFGMTASLNAPEALKEMEKMLYDN |
1N4A Chain:A ((2-211)) | ----------------------------------PRVITLSPANTELAFAAGITPVGV-SSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQ-NQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIV--ITGGPDQIPKIKQYWGEQLK---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79698 for 1521 contacts (-52.4/contact) +
2D Compatibility (PS) -22128 + (NN) -12313 + (LL) 6536
1D Compatibility (HY) -8400 + (ID) 2450
Total energy: -118453.0 ( -77.88 by residue)
QMean score : 0.447
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