Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEQREKLLEIHNLKQYFNKGTASEVRAVDDISFDIYKGETLGLVGESGCGKSTTGRTIIRLYDATGGEVIYNGKDVHARKSRKEMLEFRRKMQMIFQDPYASLNPRMKV-KDIIAEGIRIHGLAKTPEETNKQVYDLLETVGLSKEHAGRYPHEFSGGQRQRIGIARALAVQPEFIIADEPISALDVSIQAQVVNLLRQLQKEKNLTYLFIAHDLSMVKYISDRIGVMYFGKLVELAPANDLYHAPLHPYTESLLSAIPLPDPNYERTRVRKTYDPTSHNYKDGDEIKMREIAPGHFVYCSEEEEVMYKEKHAKLTAEAAAK |
4U00 Chain:A ((3-241)) | ------PIIRIRNLHKWFGP-----LHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGEVVVDGLSV---KDDRALREIRREVGMVFQQ--FNLFPHMTVLENVTLAPMRVRRWPR--EKAEKKALELLERVGIL-DQARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDL-AQGGMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRV---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128792 for 1981 contacts (-65.0/contact) +
2D Compatibility (PS) -25559 + (NN) -7132 + (LL) 4948
1D Compatibility (HY) -22400 + (ID) 4150
Total energy: -183085.0 ( -92.42 by residue)
QMean score : 0.463
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