Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAGILGVGKYVPEKIVTNFDLEKIMDTSDEWIRTRTGIEERRIARDDEYTHDLAYEAAKVAIKNAGLTPDDIDLFIVATVTQEATFPSVANIIQDRLGAKNAAGMDVEAACAGFTFGVVTAAQFIKTGAYKNIVVVGADKLSKITNWDDRTTAVLFGDGAGAVVMGPVSDDHGLLSFDLGSDGSGGKYLNLDENKKIYMNGREVFRFAVRQMGEASLRVLERAGLEKEDLDLLIPHQANIRIMEASRERLNLPEEKLMKTVHKYGNTSSSSIALALVDAVEEGRIKDNDNVLLVGFGGGLTWGALIIRWGK
2EBD Chain:A ((1-309))MGTKIIGTGVYLPKNVLTNFDLEKIVDTSDEWITTRTGIKERRIAKEETITY-MATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKGVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEAVDWEDRSTCVLFGDGAGAVVVTRSEDKSDILATRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEAIKEGKVKRGDLILMTAMGGGLTWGAVLLRY--


General information:
TITO was launched using:
RESULT:

Template: 2EBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -207406 for 2923 contacts (-71.0/contact) +
2D Compatibility (PS) -33168 + (NN) -14334 + (LL) -184
1D Compatibility (HY) -31200 + (ID) 7600
Total energy: -293892.0 ( -100.54 by residue)
QMean score : 0.566

(partial model without unconserved sides chains):
PDB file : Tito_2EBD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2EBD-query.scw
PDB file : Tito_Scwrl_2EBD.pdb: