Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQKLIYFLSQTH-IRSAIAEAWAKRLSLSNVKFISGSWHKSKSTPFIAEALNEFAIEPPESLSYSPSSELLADADLIVTIYDSAHETAPKFPANIQEKIIYWDIDDPEQEIAL-PQKWASYQEVCDNIALSVKNLEHVLIEA
1Z2D Chain:A ((1-132))
MENKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADKCPMTPPHVKRE--HWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLK---------
General information:
TITO was launched using:
RESULT:
Template:
1Z2D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52479 for 1047 contacts (-50.1/contact) +
2D Compatibility (PS) -14025 + (NN) -8407 + (LL) 1472
1D Compatibility (HY) -8400 + (ID) 2100
Total energy: -83939.0 ( -80.17 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_1Z2D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z2D-query.scw
PDB file :
Tito_Scwrl_1Z2D.pdb
: