Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNANGNLKKCPITISSYTLGTEVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKKE-QTTFHMARLFGVKHINCGLL---EKIPEEQI----IVALGELCDRAEE--LIIGLEFM--PYSGVADLQAAWRVAEACGRDNAQLICDTWHWARANQTAESIKNVPADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYGDTVGFAKILKEHGVNPRVMGVEVISDSMVATGLEYAALKVYNATKKVLDEAWPEISPR
1I6N Chain:A ((20-248))
-----------------------------LELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIVNTVNRDNVGLVLDSFHFHAMGSNIESLKQADGKKIFIYHIDDTEDFPIGFLTDE---DRVWPGQGAIDLDAHLSALKEIGFS-DVVSVELF----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1I6N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123375 for 1664 contacts (-74.1/contact) +
2D Compatibility (PS) -23732 + (NN) -12883 + (LL) 3808
1D Compatibility (HY) -13600 + (ID) 2800
Total energy: -172582.0 ( -103.72 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_1I6N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I6N-query.scw
PDB file :
Tito_Scwrl_1I6N.pdb
: