Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTINTKSQLPIYEQIVQKIKEQVVKGVLQEGEKILSIREFASRIGVNPNTVSKAYQELERQEVIITVKGKGTFIANQTDKLSSPKKLAETRTKLKETILDLVYLGVNIEEIHKLADEYSQDIIGGDVVEG
4R1H Chain:A ((11-75))
----------PIYKQIVHYIHTEIVTGTYEAGDKLLSVRELATKLEVNPTTIQRAYAELEETEIIYTVRGTGKYL--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4R1H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38970 for 419 contacts (-93.0/contact) +
2D Compatibility (PS) -6862 + (NN) 611 + (LL) 4684
1D Compatibility (HY) -8800 + (ID) 1550
Total energy: -50887.0 ( -121.45 by residue)
QMean score : 0.789
(partial model without unconserved sides chains):
PDB file :
Tito_4R1H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R1H-query.scw
PDB file :
Tito_Scwrl_4R1H.pdb
: