Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFILEVGSLADWVSGLATVGALFWAIKLNSNENRKRLTILFRHSFVSKKNGIIISDGKPKVFIITPVNNSKFSLEINFRQILLVPSLMD-RLLFRAEPKKLSN----IEALLKQLENKANWQIIKPNLSGEPIMFDYEFIVKQIKKYA-DGKRFNFAIEIQFIDSTSKIFKHKEKLELRKIKGL
2G25 Chain:A ((464-545))
-------------------------------------------------------------------------SRQPNFTEKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQY------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2G25.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12147 for 331 contacts (-36.7/contact) +
2D Compatibility (PS) -7618 + (NN) -2578 + (LL) 7780
1D Compatibility (HY) -2800 + (ID) 1200
Total energy: -18563.0 ( -56.08 by residue)
QMean score : 0.165
(partial model without unconserved sides chains):
PDB file :
Tito_2G25.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G25-query.scw
PDB file :
Tito_Scwrl_2G25.pdb
: