Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRKETIQFGAIIHGVGGTTDGWRHPDINPAASTDLDFYKTRAKIAEQGLFSFVFIADGLFISEKSIPHFLNRFEPITILSALAESTENIGLVGTFSTSFTEPFTLARQLSSLDHISSGRAGWNLVTSPQEGAARNHSKKNLPTHSDRYTIAAEHLKVVRGLWNSWEEDAFTYNKETGEFFNPEKLHHLNHQGEYFQVEGPLNIGRSKQGEPVVFQAGASSTGRDFAAQNAEAIFTHSDSLEEAVEFYRDVKSRAEKAGRNADEVRIFPGISPIVADTLEEAEAKYTEFASLIPIENAVTYLARYFDDYDLSQFDLDAPFPDLGDIGKNAFQSTTDRIKKEAKERHLTLRQVATEAATPKT------PFIGTKEQVADLIEVWFQNEAADGFIIASDIPG-TFETFVEQVIPLLQSRGLYRNEYPATTLRGNLGLTIPQNKQAVETK |
| 3SDO Chain:A ((5-445)) | MTRKH-IHFGVLIQGAGANMNAWKHPSVPPDASVNFDFYVDRARRAENAGIAFAFIADSAYVTPKSAPHFLNRFEPISLLSALAVLTSKIGLVGTMSSSYSEPYNVARQFASLDLISGGRAGWNVVTSSIEGTGKNYGRPH-PDHAQRYAIAAEHLDVVQGLWDSWDDDALVRDRATGRFFDPDKLHRLDHRGRFFSVEGPLNIRRSPQGQPVIFQAGSSDDGIDLAGRSADAVFSNGSTFDEARVFYRRVKAAAAAAGRNPDHVKVFPGIGPIVGATQQEADDKYRQVRDLLSPREALAYLSHFFQQHDFSVYPLDGPFPDIGTLGSDGFQSTTDNIKRLARERKLTLREVAYEVSTRRSNIGTSEAFIGTPEAVASEMIRWVDEGAADGFMLGLPVTGFGLDDFVDHVLPVLSARGYFDPVRRGATLRDHLGLPYKESRYA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164117 for 3695 contacts (-44.4/contact) +
2D Compatibility (PS) -47105 + (NN) -28123 + (LL) 640
1D Compatibility (HY) -39600 + (ID) 10950
Total energy: -289255.0 ( -78.28 by residue)
QMean score : 0.543
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