Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIVLVCAAGMSTSLLVTKMRKAAEERGETCEIEAYSIAEVSNLIDDADVVLLGPQVRYQKKTVDELAAGKIPVDVIDMAAYGTMNGEKVLGQALDLINGFQK
2WY2 Chain:D ((2-91))
-KHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNK-PVEVIDSLLYGKVDGLGVL------------
General information:
TITO was launched using:
RESULT:
Template:
2WY2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68871 for 669 contacts (-102.9/contact) +
2D Compatibility (PS) -9920 + (NN) -3061 + (LL) 1048
1D Compatibility (HY) -9200 + (ID) 2150
Total energy: -92154.0 ( -137.75 by residue)
QMean score : 0.667
(partial model without unconserved sides chains):
PDB file :
Tito_2WY2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WY2-query.scw
PDB file :
Tito_Scwrl_2WY2.pdb
: