Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKPKIVILGAGYGGLKTLRKLQQRNLEAEIVLVNKNDYHHETTWLHEAAAGTIEPEKLMYPLDKVVNDTK--TTFIQDTVVKINKDEKTVTLDA--------------------NGDISYDYLLIALGSEAETFGISGLKEYAFTITSVESVKKIRAHIEAQFAKW----KTDP-RDELLTIIVGGAGFTGIEFLGELTNRIPELVKQYDVP--REKVRIYCMEAAPKVLPQFDAKLVDYGVGVLEDRGVEFH----VGKPVKEATADGVKYAESENEVREIKAATIIWAAGVRGNSVIE------ASGFEAGRGRVKVNNNLTVPGNEEILIVGDCSLIINPANDRPFPPTAQIAMQQADVAAVNLAKLVK-----------GETDLQDFVYHEKGTVCSLGDNDAIGVVFGKNLKGYPASVMKKVIDDRALLLIGGSGVLASKGKFKFYK
4GAP Chain:A ((11-454))--KPNVLILGSGWGAISFLKHIDTKKYNVSII--SPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKF-LPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRG-LAVNDFLQVKGSNNIFAIGDNAFA-------GLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKIDLLFEENNFKPFKYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYL---SMILSARSRLKVF-


General information:
TITO was launched using:
RESULT:

Template: 4GAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -228165 for 3205 contacts (-71.2/contact) +
2D Compatibility (PS) -40844 + (NN) -7985 + (LL) 568
1D Compatibility (HY) -26800 + (ID) 6050
Total energy: -309276.0 ( -96.50 by residue)
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_4GAP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GAP-query.scw
PDB file : Tito_Scwrl_4GAP.pdb: