Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVLVIGANGKIGRLLVEKLAMEKGFFV-RAMVRKAEQVSELEKLG--AKPIIADLKK--DFHYAYDEIEA-VIFTAGSGGHTPASETV----------------NIDQNGAIKAIETAKEKGVRRFIIVSSYGADNPENGPESL--AHYLKAKQAADEELKKSGLDYTIVRPVGLSDDPA------TGKIAEVSGKPKTNIPRADVADFISEALSEKSSFYKTYTI----ESGDTPIKQFFN
1XQ6 Chain:A ((6-242))
-TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK---EKIGGEADVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDF--
General information:
TITO was launched using:
RESULT:
Template:
1XQ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82719 for 1597 contacts (-51.8/contact) +
2D Compatibility (PS) -23012 + (NN) -17276 + (LL) 512
1D Compatibility (HY) -12800 + (ID) 3500
Total energy: -138795.0 ( -86.91 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_1XQ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XQ6-query.scw
PDB file :
Tito_Scwrl_1XQ6.pdb
: