Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEKQSALESKARSWLIERGVEIDDIAELVLFLQQKYHPGLELEICRQNVEHVLRKREVQNAVLTGIQLDVMAEKGELVQPLQNIISADEGLYGVDEILALSIVNVYGSIGFTNYGYIDKVKPGILAKLNEH-DGIAVHTFLDDIVGAIAAAAASRLAHSYHDDIVN
1TLQ Chain:A ((15-164))
-----------TKDMLNKRGVMIEDIARIVQKLQEKYNPNLPLSVCMENVEKVLNKREIIHAVLTGLALDQLAEQKLLPEPLQHLVETDEPLYGIDEIIPLSIVNVYGSIGLTNFGYLDKEKIGIIKELDESPDGI--HTFLDDIVAALAAAAASRIAHTHQD----
General information:
TITO was launched using:
RESULT:
Template:
1TLQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120526 for 1232 contacts (-97.8/contact) +
2D Compatibility (PS) -15739 + (NN) -6050 + (LL) 1696
1D Compatibility (HY) -17600 + (ID) 4500
Total energy: -162719.0 ( -132.08 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_1TLQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TLQ-query.scw
PDB file :
Tito_Scwrl_1TLQ.pdb
: