Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKHIVLIVVACITVIAVFMYIVQINNSELKYQNRAQIKIASQMASQNEQTDNSIVSEITYK
3WU2 Chain:J ((20-31))
----------GVIVIVGLFFYG----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3WU2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4550 for 38 contacts (-119.7/contact) +
2D Compatibility (PS) -1071 + (NN) 703 + (LL) 4756
1D Compatibility (HY) -2800 + (ID) 150
Total energy: -3112.0 ( -81.89 by residue)
QMean score : 0.999
(partial model without unconserved sides chains):
PDB file :
Tito_3WU2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WU2-query.scw
PDB file :
Tito_Scwrl_3WU2.pdb
: