Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKYFITIMILLFGALSLSACQKDDEVENSSPPKVDLKNEIPIILIHGSGGDTHSLDEMADHLMNKYKSSNEAMSMSINSNGKIAYQGALTKDAKRPIIKFGFDQNQ---ATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPTLRKLVAIGSPFNDLDPDDNGDGLAFNKLPSNTPQLDYFIDKKTKISTDLEVLSIAGALSEDNLTDGIVPTNSSLASRLFMPNNAKVYMEDLQVGESAIHQTLHETSESIEKT-HWFLEKSSPEKKEIKLISK |
| 3LP5 Chain:A ((6-239)) | -----------------------------------------PVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTSTTAKTSMFKEL----------YRYRTGLPESLTVYSIAG--TENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNKQIVSLIRQYLLAETMPDK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41449 for 1912 contacts (-21.7/contact) +
2D Compatibility (PS) -25006 + (NN) -16383 + (LL) 4312
1D Compatibility (HY) -15200 + (ID) 3150
Total energy: -96876.0 ( -50.67 by residue)
QMean score : 0.420
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