Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIKQAADMFGLTVDTLRYYERVGVIPPVHRNESGYRDYKTSDLNWVYLVKNLRNAGLSVESLIEFATLAQLRETQNVEAAQKQVLVDQLKELDEKLAEMKQVRDLLVYKIDSYDSHIAQFKAGELNADNVEKLWERDKF
1Q06 Chain:A ((1-111))
MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNL--FNDPQRHSADVKRRTLEKVAEIERHIEELQSMRDQLL--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44776 for 661 contacts (-67.7/contact) +
2D Compatibility (PS) -11732 + (NN) -9654 + (LL) 2392
1D Compatibility (HY) -6000 + (ID) 1700
Total energy: -71470.0 ( -108.12 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_1Q06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q06-query.scw
PDB file :
Tito_Scwrl_1Q06.pdb
: