Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQQESRMKVADNSGAREVLTIKVLGGSGRKTANIGDVVVCTVKQATPGGVVKKGEVVKAVIVRTKSGARRQDGSYIKFDENACVIIRDDKSPRGTRIFGPVARELRENNFMKIVSLAPEVL
1C04 Chain:D ((1-122))
MIQQESRLKVADNSGAREVLVIKVLGGSGRRYANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRPDGSYIRFDENACVIIRDDKSPRGTRIFGPVARELRDKDFMKIISLAPEVI
General information:
TITO was launched using:
RESULT:
Template:
1C04.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71248 for 958 contacts (-74.4/contact) +
2D Compatibility (PS) -13118 + (NN) -3857 + (LL) 0
1D Compatibility (HY) -15200 + (ID) 5250
Total energy: -108673.0 ( -113.44 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_1C04.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C04-query.scw
PDB file :
Tito_Scwrl_1C04.pdb
: