Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKLSLLKQDGTNAGEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKLVVLEGLTFDAPKTKEFAAFLKNISVDTKALIVVAGE-SENVELSARNLQGITVIPAESISVLEVAKHDKLIITKAAVEKVEEVLA |
| 2J28 Chain:E ((1-201)) | ---MELVLKDAQSA--LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 37576 for 1070 contacts (35.1/contact) +
2D Compatibility (PS) -19730 + (NN) 3953 + (LL) 272
1D Compatibility (HY) 13600 + (ID) 550
Total energy: 35121.0 ( 32.82 by residue)
QMean score : 0.104
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